Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hoxb9P20615 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.39□□□□□ -0.59
Hoxb9P20615 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.39□□□□□ -0.59
Hoxb9P20615 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.39□□□□□ -0.59
Hoxb9P20615 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hoxb9P20615 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm14130-201ENSMUST00000118417 987 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm27530-201ENSMUST00000184096 98 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.38□□□□□ -0.59
Hoxb9P20615 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm45433-201ENSMUST00000209386 247 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm9797-202ENSMUST00000218003 294 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.38□□□□□ -0.59
Hoxb9P20615 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Hoxb9P20615 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hoxb9P20615 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Hoxb9P20615 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.37□□□□□ -0.59
Hoxb9P20615 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm27627-201ENSMUST00000183644 150 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm29615-201ENSMUST00000185371 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28224-201ENSMUST00000186078 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm29001-201ENSMUST00000186177 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28292-201ENSMUST00000186593 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28101-201ENSMUST00000187608 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm29076-201ENSMUST00000187689 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28302-201ENSMUST00000187931 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28646-201ENSMUST00000188220 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28205-201ENSMUST00000189177 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm29032-201ENSMUST00000189797 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm28695-201ENSMUST00000190300 697 ntBASIC11.37□□□□□ -0.59
Hoxb9P20615 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hoxb9P20615 Gm37448-201ENSMUST00000192795 697 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms