Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
VimP20152 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
VimP20152 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.04□□□□□ -0.48
VimP20152 Gm15429-201ENSMUST00000151268 798 ntBASIC12.04□□□□□ -0.48
VimP20152 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.04□□□□□ -0.48
VimP20152 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.04□□□□□ -0.48
VimP20152 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.04□□□□□ -0.48
VimP20152 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
VimP20152 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
VimP20152 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.04□□□□□ -0.48
VimP20152 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
VimP20152 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
VimP20152 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VimP20152 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
VimP20152 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.03□□□□□ -0.48
VimP20152 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.03□□□□□ -0.48
VimP20152 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Gm18304-201ENSMUST00000189162 546 ntBASIC12.03□□□□□ -0.48
VimP20152 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.03□□□□□ -0.48
VimP20152 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
VimP20152 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.03□□□□□ -0.48
VimP20152 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.03□□□□□ -0.48
VimP20152 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
VimP20152 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.03□□□□□ -0.48
VimP20152 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
VimP20152 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
VimP20152 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.02□□□□□ -0.48
VimP20152 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.02□□□□□ -0.48
VimP20152 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
VimP20152 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
VimP20152 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
VimP20152 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
VimP20152 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.02□□□□□ -0.49
VimP20152 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
VimP20152 Gm11964-201ENSMUST00000120982 444 ntBASIC12.02□□□□□ -0.49
VimP20152 Gm15487-201ENSMUST00000122373 465 ntBASIC12.02□□□□□ -0.49
VimP20152 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.02□□□□□ -0.49
VimP20152 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.02□□□□□ -0.49
VimP20152 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.02□□□□□ -0.49
VimP20152 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
VimP20152 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.02□□□□□ -0.49
VimP20152 Gm27838-201ENSMUST00000184829 128 ntBASIC12.02□□□□□ -0.49
VimP20152 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.02□□□□□ -0.49
VimP20152 Gm38092-201ENSMUST00000195600 653 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms