Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Hmgn1P18608 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn1P18608 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn1P18608 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hmgn1P18608 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.86□□□□□ -0.67
Hmgn1P18608 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Hmgn1P18608 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Hmgn1P18608 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Hmgn1P18608 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gm5419-201ENSMUST00000119301 527 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Snora73a-201ENSMUST00000082453 205 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.85□□□□□ -0.67
Hmgn1P18608 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Hmgn1P18608 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Hmgn1P18608 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.84□□□□□ -0.67
Hmgn1P18608 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.84□□□□□ -0.67
Hmgn1P18608 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Hmgn1P18608 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Hmgn1P18608 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms