Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NclP09405 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
NclP09405 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NclP09405 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
NclP09405 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NclP09405 Gm44999-201ENSMUST00000207456 1493 ntBASIC17.65■□□□□ 0.42
NclP09405 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Gm14132-201ENSMUST00000117188 1719 ntBASIC17.65■□□□□ 0.42
NclP09405 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Gm15573-201ENSMUST00000119487 540 ntBASIC17.65■□□□□ 0.42
NclP09405 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC17.65■□□□□ 0.42
NclP09405 Gm17831-201ENSMUST00000205579 900 ntBASIC17.65■□□□□ 0.42
NclP09405 Gm4797-201ENSMUST00000219075 1283 ntBASIC17.65■□□□□ 0.42
NclP09405 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 AC135469.1-201ENSMUST00000225984 772 ntBASIC17.65■□□□□ 0.42
NclP09405 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NclP09405 Gm42480-201ENSMUST00000198434 2595 ntBASIC17.65■□□□□ 0.42
NclP09405 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NclP09405 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC17.65■□□□□ 0.42
NclP09405 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NclP09405 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NclP09405 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC17.64■□□□□ 0.41
NclP09405 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NclP09405 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC17.64■□□□□ 0.41
NclP09405 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC17.64■□□□□ 0.41
NclP09405 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NclP09405 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Gm29499-201ENSMUST00000189151 486 ntBASIC17.64■□□□□ 0.41
NclP09405 Gm28329-201ENSMUST00000191208 689 ntBASIC17.64■□□□□ 0.41
NclP09405 Gm29171-201ENSMUST00000191397 486 ntBASIC17.64■□□□□ 0.41
NclP09405 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC17.64■□□□□ 0.41
NclP09405 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC17.64■□□□□ 0.41
NclP09405 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NclP09405 Gm6867-201ENSMUST00000219165 425 ntBASIC17.64■□□□□ 0.41
NclP09405 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC17.64■□□□□ 0.41
NclP09405 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC17.64■□□□□ 0.41
NclP09405 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Gm9796-201ENSMUST00000062249 2250 ntBASIC17.64■□□□□ 0.41
NclP09405 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
NclP09405 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NclP09405 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
NclP09405 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC17.63■□□□□ 0.41
NclP09405 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NclP09405 Gm11956-201ENSMUST00000119525 512 ntBASIC17.63■□□□□ 0.41
NclP09405 Gm12029-201ENSMUST00000120073 832 ntBASIC17.63■□□□□ 0.41
NclP09405 Gm4726-201ENSMUST00000135604 736 ntBASIC17.63■□□□□ 0.41
NclP09405 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC17.63■□□□□ 0.41
NclP09405 Gm6019-201ENSMUST00000148369 736 ntBASIC17.63■□□□□ 0.41
NclP09405 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC17.63■□□□□ 0.41
NclP09405 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC17.63■□□□□ 0.41
NclP09405 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC17.63■□□□□ 0.41
NclP09405 Gm9132-201ENSMUST00000210182 832 ntBASIC17.63■□□□□ 0.41
NclP09405 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NclP09405 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Gm5053-201ENSMUST00000208361 1678 ntBASIC17.63■□□□□ 0.41
NclP09405 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NclP09405 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms