Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sod1P08228 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Sod1P08228 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Sod1P08228 Gm4294-201ENSMUST00000105169 614 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm10169-201ENSMUST00000121822 348 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm11960-201ENSMUST00000122068 925 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm22877-201ENSMUST00000175451 105 ntBASIC11.12□□□□□ -0.63
Sod1P08228 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.12□□□□□ -0.63
Sod1P08228 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.12□□□□□ -0.63
Sod1P08228 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC11.12□□□□□ -0.63
Sod1P08228 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sod1P08228 Gm18561-201ENSMUST00000206027 804 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.12□□□□□ -0.63
Sod1P08228 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm10263-201ENSMUST00000085163 300 ntBASIC11.12□□□□□ -0.63
Sod1P08228 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Sod1P08228 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.12□□□□□ -0.63
Sod1P08228 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Sod1P08228 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Sod1P08228 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sod1P08228 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.11□□□□□ -0.63
Sod1P08228 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Gm13117-201ENSMUST00000120894 691 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Gm15549-201ENSMUST00000121595 622 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.11□□□□□ -0.63
Sod1P08228 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.11□□□□□ -0.63
Sod1P08228 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.11□□□□□ -0.63
Sod1P08228 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.11□□□□□ -0.63
Sod1P08228 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Sod1P08228 Gm3726-201ENSMUST00000203110 785 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.11□□□□□ -0.63
Sod1P08228 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.11□□□□□ -0.63
Sod1P08228 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Gm30671-201ENSMUST00000214898 318 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.11□□□□□ -0.63
Sod1P08228 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.11□□□□□ -0.63
Sod1P08228 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Sod1P08228 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.11□□□□□ -0.63
Sod1P08228 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Sod1P08228 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Sod1P08228 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.11□□□□□ -0.63
Sod1P08228 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sod1P08228 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sod1P08228 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms