Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.61□□□□□ -0.39
TnfP06804 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
TnfP06804 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
TnfP06804 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TnfP06804 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.61□□□□□ -0.39
TnfP06804 Gm11783-201ENSMUST00000119549 885 ntBASIC12.61□□□□□ -0.39
TnfP06804 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.61□□□□□ -0.39
TnfP06804 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.61□□□□□ -0.39
TnfP06804 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm6114-201ENSMUST00000182472 968 ntBASIC12.61□□□□□ -0.39
TnfP06804 Gm7467-201ENSMUST00000185173 652 ntBASIC12.61□□□□□ -0.39
TnfP06804 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.61□□□□□ -0.39
TnfP06804 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.61□□□□□ -0.39
TnfP06804 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm43916-201ENSMUST00000205062 967 ntBASIC12.61□□□□□ -0.39
TnfP06804 Gm17831-201ENSMUST00000205579 900 ntBASIC12.61□□□□□ -0.39
TnfP06804 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.61□□□□□ -0.39
TnfP06804 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Gm29787-201ENSMUST00000222129 849 ntBASIC12.61□□□□□ -0.39
TnfP06804 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TnfP06804 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TnfP06804 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
TnfP06804 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnfP06804 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
TnfP06804 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
TnfP06804 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.6□□□□□ -0.39
TnfP06804 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.6□□□□□ -0.39
TnfP06804 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Gm22920-201ENSMUST00000102175 109 ntBASIC12.6□□□□□ -0.39
TnfP06804 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Gm17391-201ENSMUST00000171036 126 ntBASIC12.6□□□□□ -0.39
TnfP06804 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Gm38151-201ENSMUST00000195085 289 ntBASIC12.6□□□□□ -0.39
TnfP06804 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.6□□□□□ -0.39
TnfP06804 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.6□□□□□ -0.39
TnfP06804 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TnfP06804 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TnfP06804 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnfP06804 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TnfP06804 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TnfP06804 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnfP06804 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms