Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
IghmP01872 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.12□□□□□ -0.63
IghmP01872 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.12□□□□□ -0.63
IghmP01872 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.12□□□□□ -0.63
IghmP01872 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
IghmP01872 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.12□□□□□ -0.63
IghmP01872 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.12□□□□□ -0.63
IghmP01872 Gm43962-201ENSMUST00000203898 190 ntBASIC11.12□□□□□ -0.63
IghmP01872 Gm6334-201ENSMUST00000207083 228 ntBASIC11.12□□□□□ -0.63
IghmP01872 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.12□□□□□ -0.63
IghmP01872 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.12□□□□□ -0.63
IghmP01872 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.12□□□□□ -0.63
IghmP01872 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.12□□□□□ -0.63
IghmP01872 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
IghmP01872 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
IghmP01872 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
IghmP01872 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.11□□□□□ -0.63
IghmP01872 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.11□□□□□ -0.63
IghmP01872 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Gm26286-201ENSMUST00000104166 134 ntBASIC11.11□□□□□ -0.63
IghmP01872 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.11□□□□□ -0.63
IghmP01872 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.11□□□□□ -0.63
IghmP01872 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Rprl1-202ENSMUST00000198476 238 ntBASIC11.11□□□□□ -0.63
IghmP01872 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.11□□□□□ -0.63
IghmP01872 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.11□□□□□ -0.63
IghmP01872 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Gm7399-201ENSMUST00000032395 858 ntBASIC11.11□□□□□ -0.63
IghmP01872 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
IghmP01872 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.11□□□□□ -0.63
IghmP01872 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.11□□□□□ -0.63
IghmP01872 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.11□□□□□ -0.63
IghmP01872 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
IghmP01872 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.11□□□□□ -0.63
IghmP01872 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
IghmP01872 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
IghmP01872 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
IghmP01872 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
IghmP01872 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
IghmP01872 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms