Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm17812-201ENSMUST00000204935 318 ntBASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Igh-VJ558P01758 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm25668-201ENSMUST00000157700 129 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm26361-201ENSMUST00000158868 186 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm37666-201ENSMUST00000194110 866 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 AY036118-201ENSMUST00000200021 923 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm8913-201ENSMUST00000209491 641 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm17827-201ENSMUST00000211825 742 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Lect2-202ENSMUST00000225183 823 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Igh-VJ558P01758 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm11509-201ENSMUST00000117358 325 ntBASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm4157-201ENSMUST00000211647 679 ntBASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm2553-201ENSMUST00000215986 605 ntBASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Igh-VJ558P01758 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms