Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm26989-201ENSMUST00000182608 749 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ubr1O70481 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC15.16■□□□□ 0.02
Ubr1O70481 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ubr1O70481 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ubr1O70481 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC15.16■□□□□ 0.02
Ubr1O70481 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.16■□□□□ 0.02
Ubr1O70481 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm13047-201ENSMUST00000117116 815 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Gm29164-201ENSMUST00000185454 1024 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Ubr1O70481 Gm6390-201ENSMUST00000215034 589 ntBASIC15.16■□□□□ 0.02
Ubr1O70481 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ubr1O70481 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ubr1O70481 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.15■□□□□ 0.02
Ubr1O70481 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ubr1O70481 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ubr1O70481 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Gm10728-201ENSMUST00000194292 1829 ntBASIC15.15■□□□□ 0.02
Ubr1O70481 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC15.15■□□□□ 0.02
Ubr1O70481 Gm25545-201ENSMUST00000122673 323 ntBASIC15.15■□□□□ 0.02
Ubr1O70481 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC15.15■□□□□ 0.02
Ubr1O70481 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC15.15■□□□□ 0.02
Ubr1O70481 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ubr1O70481 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ubr1O70481 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ubr1O70481 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ubr1O70481 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ubr1O70481 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ubr1O70481 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ubr1O70481 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC15.14■□□□□ 0.01
Ubr1O70481 Gm15197-201ENSMUST00000120526 478 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 Gm12783-201ENSMUST00000121425 397 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.14■□□□□ 0.01
Ubr1O70481 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC15.14■□□□□ 0.01
Ubr1O70481 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC15.14■□□□□ 0.01
Ubr1O70481 Gm44008-201ENSMUST00000204345 412 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 Gm18035-201ENSMUST00000211962 589 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 AC122035.1-201ENSMUST00000227576 1016 ntBASIC15.14■□□□□ 0.01
Ubr1O70481 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ubr1O70481 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Ubr1O70481 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ubr1O70481 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ubr1O70481 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms