Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm12857-201ENSMUST00000117678 592 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm3332-201ENSMUST00000189337 928 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.8□□□□□ -0.52
Pdlim1O70400 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm9797-202ENSMUST00000218003 294 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Gm807-202ENSMUST00000224929 408 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.8□□□□□ -0.52
Pdlim1O70400 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.8□□□□□ -0.52
Pdlim1O70400 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pdlim1O70400 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm11509-201ENSMUST00000117358 325 ntBASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm14724-201ENSMUST00000118400 537 ntBASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.79□□□□□ -0.52
Pdlim1O70400 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm5363-201ENSMUST00000211927 938 ntBASIC11.79□□□□□ -0.52
Pdlim1O70400 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Pdlim1O70400 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pdlim1O70400 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pdlim1O70400 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.78□□□□□ -0.52
Pdlim1O70400 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.78□□□□□ -0.52
Pdlim1O70400 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pdlim1O70400 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Pdlim1O70400 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms