Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm14441-201ENSMUST00000121960 540 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.09□□□□□ -0.31
Trdmt1O55055 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm5982-201ENSMUST00000196234 512 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm3619-201ENSMUST00000219947 775 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Trdmt1O55055 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.09□□□□□ -0.31
Trdmt1O55055 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trdmt1O55055 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdmt1O55055 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdmt1O55055 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trdmt1O55055 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Trdmt1O55055 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm26134-201ENSMUST00000178484 110 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 Mir8093-201ENSMUST00000185043 137 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm5298-201ENSMUST00000201122 892 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm9139-201ENSMUST00000218817 700 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.08□□□□□ -0.32
Trdmt1O55055 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trdmt1O55055 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Gm23105-201ENSMUST00000083719 134 ntBASIC13.08□□□□□ -0.32
Trdmt1O55055 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trdmt1O55055 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trdmt1O55055 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.07□□□□□ -0.32
Trdmt1O55055 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trdmt1O55055 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Mir6407-201ENSMUST00000184510 101 ntBASIC13.07□□□□□ -0.32
Trdmt1O55055 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.07□□□□□ -0.32
Trdmt1O55055 Gm45120-201ENSMUST00000208880 408 ntBASIC13.07□□□□□ -0.32
Trdmt1O55055 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.07□□□□□ -0.32
Trdmt1O55055 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Trdmt1O55055 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trdmt1O55055 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.07□□□□□ -0.32
Trdmt1O55055 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trdmt1O55055 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.07□□□□□ -0.32
Trdmt1O55055 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trdmt1O55055 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms