Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.09□□□□□ -0.47
Limk2O54785 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.09□□□□□ -0.47
Limk2O54785 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.09□□□□□ -0.47
Limk2O54785 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.09□□□□□ -0.47
Limk2O54785 Gm9555-201ENSMUST00000200908 583 ntBASIC12.09□□□□□ -0.47
Limk2O54785 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.09□□□□□ -0.47
Limk2O54785 Ntng1-201ENSMUST00000051253 327 ntBASIC12.09□□□□□ -0.47
Limk2O54785 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Limk2O54785 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Limk2O54785 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.09□□□□□ -0.47
Limk2O54785 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Limk2O54785 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Limk2O54785 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.08□□□□□ -0.48
Limk2O54785 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.08□□□□□ -0.48
Limk2O54785 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Limk2O54785 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gm15004-201ENSMUST00000119192 630 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Gm15432-201ENSMUST00000121106 195 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.08□□□□□ -0.48
Limk2O54785 Gm27438-201ENSMUST00000183480 110 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Gm19287-201ENSMUST00000203190 358 ntBASIC12.08□□□□□ -0.48
Limk2O54785 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gm17827-201ENSMUST00000211825 742 ntBASIC12.08□□□□□ -0.48
Limk2O54785 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.08□□□□□ -0.48
Limk2O54785 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.08□□□□□ -0.48
Limk2O54785 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Limk2O54785 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Limk2O54785 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.08□□□□□ -0.48
Limk2O54785 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.08□□□□□ -0.48
Limk2O54785 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Limk2O54785 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Limk2O54785 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Limk2O54785 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Limk2O54785 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Limk2O54785 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Limk2O54785 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.07□□□□□ -0.48
Limk2O54785 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Limk2O54785 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.07□□□□□ -0.48
Limk2O54785 Gm11660-201ENSMUST00000120955 412 ntBASIC12.07□□□□□ -0.48
Limk2O54785 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.07□□□□□ -0.48
Limk2O54785 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Limk2O54785 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.07□□□□□ -0.48
Limk2O54785 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.07□□□□□ -0.48
Limk2O54785 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Limk2O54785 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Gm8343-201ENSMUST00000182705 994 ntBASIC12.07□□□□□ -0.48
Limk2O54785 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.07□□□□□ -0.48
Limk2O54785 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Limk2O54785 Gm44545-201ENSMUST00000208262 746 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms