Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.41□□□□□ -0.42
Ebf3O08791 Gm8100-201ENSMUST00000182906 988 ntBASIC12.41□□□□□ -0.42
Ebf3O08791 Gm44124-201ENSMUST00000204159 472 ntBASIC12.41□□□□□ -0.42
Ebf3O08791 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.41□□□□□ -0.42
Ebf3O08791 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ebf3O08791 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ebf3O08791 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf3O08791 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf3O08791 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.4□□□□□ -0.42
Ebf3O08791 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Ebf3O08791 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.4□□□□□ -0.42
Ebf3O08791 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm26035-201ENSMUST00000083065 308 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 Gm10288-201ENSMUST00000084614 537 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.4□□□□□ -0.42
Ebf3O08791 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf3O08791 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Ebf3O08791 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf3O08791 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.4□□□□□ -0.43
Ebf3O08791 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf3O08791 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.39□□□□□ -0.43
Ebf3O08791 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf3O08791 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.39□□□□□ -0.43
Ebf3O08791 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.39□□□□□ -0.43
Ebf3O08791 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Ebf3O08791 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ebf3O08791 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Ebf3O08791 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf3O08791 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf3O08791 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf3O08791 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms