Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
B020004C17RikJ3QP07 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm19587-201ENSMUST00000191395 545 ntBASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm43380-201ENSMUST00000200421 220 ntBASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gm5468-202ENSMUST00000227851 682 ntBASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
B020004C17RikJ3QP07 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm22379-201ENSMUST00000157480 131 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm8451-201ENSMUST00000170338 447 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm8197-202ENSMUST00000193422 934 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm17825-201ENSMUST00000206836 794 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm39288-201ENSMUST00000210554 446 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm7536-201ENSMUST00000077389 444 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Gm5453-201ENSMUST00000080866 447 ntBASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
B020004C17RikJ3QP07 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms