Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Btrc-209ENSMUST00000224478 2194 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shisa8J3QNX5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Shisa8J3QNX5 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Shisa8J3QNX5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Shisa8J3QNX5 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.67
Shisa8J3QNX5 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm7809-201ENSMUST00000153199 742 ntBASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm17931-201ENSMUST00000208132 634 ntBASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Shisa8J3QNX5 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.82□□□□□ -0.68
Shisa8J3QNX5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm23912-201ENSMUST00000104687 87 ntBASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Gm3890-201ENSMUST00000182416 207 ntBASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Shisa8J3QNX5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms