Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC17.74■□□□□ 0.43
Pcf11G3X9Z4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Gm12274-201ENSMUST00000120062 385 ntBASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Gm9081-201ENSMUST00000182346 991 ntBASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcf11G3X9Z4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm7278-201ENSMUST00000119836 1401 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Olfml3-204ENSMUST00000169286 874 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm26976-201ENSMUST00000182929 908 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm37638-201ENSMUST00000194337 1123 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm30946-201ENSMUST00000198288 724 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm44008-201ENSMUST00000204345 412 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm19046-201ENSMUST00000221263 1298 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm5308-201ENSMUST00000196752 1354 ntBASIC17.72■□□□□ 0.43
Pcf11G3X9Z4 Gm28424-201ENSMUST00000187393 1319 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Gm12969-201ENSMUST00000120199 1004 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Gm11354-201ENSMUST00000121974 422 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Gm6548-201ENSMUST00000167498 1165 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Gm22877-201ENSMUST00000175451 105 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Gm3836-201ENSMUST00000211377 1613 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Nupl1-206ENSMUST00000225111 2936 ntBASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcf11G3X9Z4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcf11G3X9Z4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC17.71■□□□□ 0.42
Pcf11G3X9Z4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm15197-201ENSMUST00000120526 478 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm13022-201ENSMUST00000121181 285 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 AC124457.1-201ENSMUST00000198845 120 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm45758-201ENSMUST00000212448 1006 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 AC153152.3-201ENSMUST00000222188 1135 ntBASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcf11G3X9Z4 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms