Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NpcdF8VQB8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm24248-201ENSMUST00000157321 322 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm8723-201ENSMUST00000166076 820 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm8701-201ENSMUST00000169259 874 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm18514-201ENSMUST00000218980 436 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.35□□□□□ -0.11
NpcdF8VQB8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NpcdF8VQB8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC14.34□□□□□ -0.11
NpcdF8VQB8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.34□□□□□ -0.11
NpcdF8VQB8 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.34□□□□□ -0.11
NpcdF8VQB8 Gm22846-201ENSMUST00000157706 270 ntBASIC14.34□□□□□ -0.11
NpcdF8VQB8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Gm6108-201ENSMUST00000208365 367 ntBASIC14.34□□□□□ -0.11
NpcdF8VQB8 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.34□□□□□ -0.11
NpcdF8VQB8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NpcdF8VQB8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NpcdF8VQB8 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm23912-201ENSMUST00000104687 87 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm15004-201ENSMUST00000119192 630 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm19587-201ENSMUST00000191395 545 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm5340-201ENSMUST00000203733 880 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NpcdF8VQB8 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NpcdF8VQB8 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.33□□□□□ -0.12
NpcdF8VQB8 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms