Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC166341.2-201ENSMUST00000220571 120 ntBASIC14.26□□□□□ -0.13
Ube4aE9Q735 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.26□□□□□ -0.13
Ube4aE9Q735 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ube4aE9Q735 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Gm8492-201ENSMUST00000182375 987 ntBASIC14.25□□□□□ -0.13
Ube4aE9Q735 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Gm4978-201ENSMUST00000071565 801 ntBASIC14.25□□□□□ -0.13
Ube4aE9Q735 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.25□□□□□ -0.13
Ube4aE9Q735 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ube4aE9Q735 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Gm13937-201ENSMUST00000121000 988 ntBASIC14.24□□□□□ -0.13
Ube4aE9Q735 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Gm29155-201ENSMUST00000185910 269 ntBASIC14.24□□□□□ -0.13
Ube4aE9Q735 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube4aE9Q735 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.23□□□□□ -0.13
Ube4aE9Q735 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms