Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm10051-201ENSMUST00000145209 414 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm5616-201ENSMUST00000165252 384 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm8741-201ENSMUST00000174736 384 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm37666-201ENSMUST00000194110 866 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Usf3B2RUQ2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm23119-201ENSMUST00000158610 140 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm25517-201ENSMUST00000083865 134 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm7666-201ENSMUST00000146631 819 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Gm17827-201ENSMUST00000211825 742 ntBASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Usf3B2RUQ2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usf3B2RUQ2 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Usf3B2RUQ2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.81
Usf3B2RUQ2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usf3B2RUQ2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Usf3B2RUQ2 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Usf3B2RUQ2 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms