Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm45224-201ENSMUST00000208203 414 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Map1b-203ENSMUST00000223725 2669 ntBASIC12.03□□□□□ -0.48
Rrn3B2RS91 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rrn3B2RS91 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rrn3B2RS91 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm24990-201ENSMUST00000157406 323 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm5616-201ENSMUST00000165252 384 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm8741-201ENSMUST00000174736 384 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm18038-201ENSMUST00000197900 485 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm5455-201ENSMUST00000058710 715 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.02□□□□□ -0.49
Rrn3B2RS91 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rrn3B2RS91 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Gm14028-201ENSMUST00000117434 479 ntBASIC12.01□□□□□ -0.49
Rrn3B2RS91 Gm15610-201ENSMUST00000120584 195 ntBASIC12.01□□□□□ -0.49
Rrn3B2RS91 Gm14247-201ENSMUST00000120950 237 ntBASIC12.01□□□□□ -0.49
Rrn3B2RS91 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.01□□□□□ -0.49
Rrn3B2RS91 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms