Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm37935-201ENSMUST00000192012 982 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm44405-201ENSMUST00000198952 126 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm45925-201ENSMUST00000218882 744 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm10076-201ENSMUST00000073238 384 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Gm12887B1AVM1 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.59□□□□□ -0.88
Gm12887B1AVM1 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Gm12887B1AVM1 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm17931-201ENSMUST00000208132 634 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm5904-201ENSMUST00000210286 865 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm39404-201ENSMUST00000216350 313 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm15823-201ENSMUST00000064305 670 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.58□□□□□ -0.88
Gm12887B1AVM1 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms