Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.67□□□□□ -0.54
Chd3B1AR17 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd3B1AR17 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.66□□□□□ -0.54
Chd3B1AR17 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm14441-201ENSMUST00000121960 540 ntBASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm37458-201ENSMUST00000194055 410 ntBASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm43916-201ENSMUST00000205062 967 ntBASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Chd3B1AR17 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.66□□□□□ -0.54
Chd3B1AR17 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.66□□□□□ -0.54
Chd3B1AR17 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.66□□□□□ -0.54
Chd3B1AR17 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.66□□□□□ -0.54
Chd3B1AR17 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chd3B1AR17 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.65□□□□□ -0.54
Chd3B1AR17 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Gm12036-201ENSMUST00000120008 530 ntBASIC11.65□□□□□ -0.54
Chd3B1AR17 Gm12899-201ENSMUST00000120565 551 ntBASIC11.65□□□□□ -0.54
Chd3B1AR17 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.65□□□□□ -0.54
Chd3B1AR17 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.65□□□□□ -0.54
Chd3B1AR17 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Chd3B1AR17 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Chd3B1AR17 Paupar-201ENSMUST00000194826 3482 ntBASIC11.65□□□□□ -0.54
Chd3B1AR17 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd3B1AR17 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Chd3B1AR17 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Chd3B1AR17 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Chd3B1AR17 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Chd3B1AR17 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Chd3B1AR17 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chd3B1AR17 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chd3B1AR17 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Chd3B1AR17 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms