Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Gm6013-201ENSMUST00000212264 699 ntBASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Gm45880-201ENSMUST00000213041 853 ntBASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc112A0AUP1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.58□□□□□ -0.23
Ccdc112A0AUP1 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc112A0AUP1 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.58□□□□□ -0.23
Ccdc112A0AUP1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc112A0AUP1 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
Ccdc112A0AUP1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Gm6114-201ENSMUST00000182472 968 ntBASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Gm8712-201ENSMUST00000221090 701 ntBASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc112A0AUP1 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm12015-201ENSMUST00000117065 843 ntBASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm13297-201ENSMUST00000120205 934 ntBASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm37489-201ENSMUST00000191883 159 ntBASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc112A0AUP1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm11989-201ENSMUST00000117240 672 ntBASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm11362-201ENSMUST00000118838 850 ntBASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm11700-201ENSMUST00000119409 403 ntBASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm26956-201ENSMUST00000182176 986 ntBASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm9230-201ENSMUST00000188228 532 ntBASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm10608-202ENSMUST00000213924 676 ntBASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc112A0AUP1 Gm10312-201ENSMUST00000078515 489 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms