Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gm11425-201ENSMUST00000119608 498 ntBASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gm25043-201ENSMUST00000158604 212 ntBASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Mospd4-201ENSMUST00000180618 576 ntBASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gm9396-201ENSMUST00000076703 567 ntBASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.75□□□□□ -0.69
H2afb3S4R1G7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Rprl1-201ENSMUST00000158050 327 ntBASIC10.74□□□□□ -0.69
H2afb3S4R1G7 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gm9996-201ENSMUST00000070359 913 ntBASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H2afb3S4R1G7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H2afb3S4R1G7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms