Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cldn9Q9Z0S7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm14381-201ENSMUST00000122105 414 ntBASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm6114-201ENSMUST00000182472 968 ntBASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm4607-201ENSMUST00000206649 577 ntBASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm44651-201ENSMUST00000207343 372 ntBASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cldn9Q9Z0S7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cldn9Q9Z0S7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Gm24255-201ENSMUST00000104481 128 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Gm8956-201ENSMUST00000203939 825 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Gm5455-201ENSMUST00000058710 715 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Gm9899-201ENSMUST00000065519 555 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cldn9Q9Z0S7 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn9Q9Z0S7 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.44□□□□□ -0.58
Cldn9Q9Z0S7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Cldn9Q9Z0S7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn9Q9Z0S7 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cldn9Q9Z0S7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms