Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Smarcb1Q9Z0H3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm19459-201ENSMUST00000176240 835 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm28937-201ENSMUST00000185413 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm29400-201ENSMUST00000187208 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm28662-201ENSMUST00000188446 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm28251-201ENSMUST00000188835 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm37318-201ENSMUST00000194325 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm38017-201ENSMUST00000194768 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm37287-201ENSMUST00000195449 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm37793-201ENSMUST00000195548 695 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm5051-201ENSMUST00000204085 485 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smarcb1Q9Z0H3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm14585-201ENSMUST00000120713 634 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm9132-201ENSMUST00000210182 832 ntBASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Smarcb1Q9Z0H3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms