Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm11244-201ENSMUST00000121243 237 ntBASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm22902-201ENSMUST00000158488 302 ntBASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm45118-201ENSMUST00000208928 825 ntBASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Gm10179-201ENSMUST00000086233 688 ntBASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Scn8aQ9WTU3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm11246-201ENSMUST00000120880 345 ntBASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm7150-201ENSMUST00000122032 981 ntBASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Scn8aQ9WTU3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm12208-201ENSMUST00000122004 163 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm7666-201ENSMUST00000146631 819 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm5451-201ENSMUST00000080545 579 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scn8aQ9WTU3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms