Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Gng5-ps-201ENSMUST00000120931 205 ntBASIC13.93□□□□□ -0.18
Scn11aQ9R053 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Mir6407-201ENSMUST00000184510 101 ntBASIC13.93□□□□□ -0.18
Scn11aQ9R053 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.93□□□□□ -0.18
Scn11aQ9R053 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.93□□□□□ -0.18
Scn11aQ9R053 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.93□□□□□ -0.18
Scn11aQ9R053 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn11aQ9R053 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm9166-201ENSMUST00000120293 561 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm17070-201ENSMUST00000170463 784 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm5870-201ENSMUST00000196461 282 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm29763-201ENSMUST00000205306 616 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm7904-201ENSMUST00000217049 465 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.92□□□□□ -0.18
Scn11aQ9R053 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn11aQ9R053 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm8111-201ENSMUST00000117659 987 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm39288-201ENSMUST00000210554 446 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm8768-201ENSMUST00000220020 826 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm26368-201ENSMUST00000157826 118 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm43912-201ENSMUST00000204352 538 ntBASIC13.91□□□□□ -0.18
Scn11aQ9R053 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scn11aQ9R053 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn11aQ9R053 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn11aQ9R053 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn11aQ9R053 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.9□□□□□ -0.18
Scn11aQ9R053 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scn11aQ9R053 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms