Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm13996-201ENSMUST00000118456 430 ntBASIC13.35□□□□□ -0.27
AmfrQ9R049 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
AmfrQ9R049 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Rprl1-202ENSMUST00000198476 238 ntBASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.35□□□□□ -0.27
AmfrQ9R049 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.35□□□□□ -0.27
AmfrQ9R049 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.35□□□□□ -0.27
AmfrQ9R049 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.35□□□□□ -0.27
AmfrQ9R049 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.35□□□□□ -0.27
AmfrQ9R049 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
AmfrQ9R049 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm19187-201ENSMUST00000206781 892 ntBASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.34□□□□□ -0.27
AmfrQ9R049 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm9996-201ENSMUST00000070359 913 ntBASIC13.34□□□□□ -0.27
AmfrQ9R049 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.34□□□□□ -0.27
AmfrQ9R049 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.34□□□□□ -0.27
AmfrQ9R049 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.34□□□□□ -0.27
AmfrQ9R049 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
AmfrQ9R049 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AmfrQ9R049 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
AmfrQ9R049 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
AmfrQ9R049 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm26361-201ENSMUST00000158868 186 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm32999-201ENSMUST00000192693 562 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
AmfrQ9R049 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.33□□□□□ -0.28
AmfrQ9R049 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
AmfrQ9R049 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms