Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm13570-201ENSMUST00000140763 309 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm26361-201ENSMUST00000158868 186 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm26461-201ENSMUST00000175064 290 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm2260-201ENSMUST00000184965 657 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm10076-201ENSMUST00000073238 384 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tubb3Q9ERD7 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm12036-201ENSMUST00000120008 530 ntBASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm44651-201ENSMUST00000207343 372 ntBASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm39404-201ENSMUST00000216350 313 ntBASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tubb3Q9ERD7 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm14277-201ENSMUST00000121195 360 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm14832-201ENSMUST00000121289 322 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 Gm28882-201ENSMUST00000185504 314 ntBASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tubb3Q9ERD7 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms