Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rtp4Q9ER80 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm43275-201ENSMUST00000202053 1020 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm19187-201ENSMUST00000206781 892 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rtp4Q9ER80 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rtp4Q9ER80 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms