Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Hmgn3Q9DCB1 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm13315-201ENSMUST00000120376 991 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm5706-201ENSMUST00000181525 993 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm42693-201ENSMUST00000196779 631 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm18018-201ENSMUST00000198273 408 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm10254-201ENSMUST00000052888 867 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hmgn3Q9DCB1 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.16□□□□□ -0.62
Hmgn3Q9DCB1 Gm28911-201ENSMUST00000188837 117 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms