Protein–RNA interactions for Protein: Q9DBT3

Ccdc97, Coiled-coil domain-containing protein 97, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97Q9DBT3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Gm17420-201ENSMUST00000164753 153 ntBASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc97Q9DBT3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm14999-201ENSMUST00000121039 624 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm2594-201ENSMUST00000214774 742 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.23□□□□□ -0.45
Ccdc97Q9DBT3 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
Ccdc97Q9DBT3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms