Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Gm29199-201ENSMUST00000187766 775 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Gm7003-201ENSMUST00000195089 312 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Gm4607-201ENSMUST00000206649 577 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Gm18212-201ENSMUST00000211678 889 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Chmp2aQ9DB34 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Gm15236-201ENSMUST00000117309 379 ntBASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Gm17931-201ENSMUST00000208132 634 ntBASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Chmp2aQ9DB34 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm24990-201ENSMUST00000157406 323 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm27390-201ENSMUST00000184516 176 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm17827-201ENSMUST00000211825 742 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Chmp2aQ9DB34 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms