Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm15198-201ENSMUST00000117283 177 ntBASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm14723-201ENSMUST00000118686 215 ntBASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm43179-201ENSMUST00000198797 275 ntBASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm2553-201ENSMUST00000215986 605 ntBASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.03■□□□□ -0
Chmp4bQ9D8B3 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm1995-201ENSMUST00000220838 2602 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm26286-201ENSMUST00000104166 134 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm25668-201ENSMUST00000157700 129 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 AA914427-201ENSMUST00000193194 1166 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm7783-201ENSMUST00000204795 781 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Olfr1347-205ENSMUST00000220413 964 ntBASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chmp4bQ9D8B3 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Ptprm-203ENSMUST00000224091 3773 ntBASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4bQ9D8B3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Gm22323-201ENSMUST00000103832 109 ntBASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4bQ9D8B3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms