Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm13786-201ENSMUST00000122371 333 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm17420-201ENSMUST00000164753 153 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 AY702102-202ENSMUST00000194651 1173 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Gm44913-201ENSMUST00000208060 2990 ntBASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Chmp4cQ9D7F7 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Gm12742-201ENSMUST00000117326 410 ntBASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Gm35960-201ENSMUST00000202712 767 ntBASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp4cQ9D7F7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Gm7722-201ENSMUST00000120646 741 ntBASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp4cQ9D7F7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms