Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Stag1Q9D3E6 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm15725-201ENSMUST00000119947 1090 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Mir8115-201ENSMUST00000184992 119 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm43186-201ENSMUST00000198130 824 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm45219-201ENSMUST00000205602 465 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm2517-201ENSMUST00000215651 348 ntBASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Stag1Q9D3E6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Stag1Q9D3E6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm23771-201ENSMUST00000178702 110 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm27910-201ENSMUST00000185004 107 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Stag1Q9D3E6 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Gm22711-201ENSMUST00000116890 133 ntBASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Gm15782-201ENSMUST00000121073 445 ntBASIC14.19□□□□□ -0.14
Stag1Q9D3E6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms