Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Fcf1Q9CTH6 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Fcf1Q9CTH6 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm23949-201ENSMUST00000104027 127 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Mir6927-201ENSMUST00000184494 71 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm28071-201ENSMUST00000190355 478 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm37809-201ENSMUST00000195050 931 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm17827-201ENSMUST00000211825 742 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm18730-201ENSMUST00000218038 343 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 AC154245.1-201ENSMUST00000224615 601 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 AC154730.1-201ENSMUST00000227874 816 ntBASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Fcf1Q9CTH6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Mir706-201ENSMUST00000102262 84 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm23200-201ENSMUST00000104379 132 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm7857-201ENSMUST00000117957 358 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm16570-201ENSMUST00000161951 436 ntBASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Fcf1Q9CTH6 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms