Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Mir1943-201ENSMUST00000158276 73 ntBASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Gm9550-201ENSMUST00000161130 862 ntBASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Gm10774-201ENSMUST00000188689 204 ntBASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm7Q9CQQ8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm7Q9CQQ8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Gm27530-201ENSMUST00000184096 98 ntBASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Gm38117-201ENSMUST00000194653 939 ntBASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm7Q9CQQ8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm4310-201ENSMUST00000177847 889 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm27390-201ENSMUST00000184516 176 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm29499-201ENSMUST00000189151 486 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm28329-201ENSMUST00000191208 689 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm29171-201ENSMUST00000191397 486 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lsm7Q9CQQ8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms