Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm19287-201ENSMUST00000203190 358 ntBASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.66□□□□□ -0.38
Sf3b1Q99NB9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm15595-201ENSMUST00000120840 961 ntBASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm17931-201ENSMUST00000208132 634 ntBASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm9132-201ENSMUST00000210182 832 ntBASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3b1Q99NB9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.65□□□□□ -0.39
Sf3b1Q99NB9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.65□□□□□ -0.39
Sf3b1Q99NB9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Sf3b1Q99NB9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sf3b1Q99NB9 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sf3b1Q99NB9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms