Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.59□□□□□ -0.39
Usp11Q99K46 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp11Q99K46 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp11Q99K46 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Usp11Q99K46 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Usp11Q99K46 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.58□□□□□ -0.39
Usp11Q99K46 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Usp11Q99K46 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.58□□□□□ -0.4
Usp11Q99K46 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm14832-201ENSMUST00000121289 322 ntBASIC12.58□□□□□ -0.4
Usp11Q99K46 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm24845-201ENSMUST00000158034 109 ntBASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm20482-202ENSMUST00000174729 825 ntBASIC12.58□□□□□ -0.4
Usp11Q99K46 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm42937-201ENSMUST00000197360 752 ntBASIC12.58□□□□□ -0.4
Usp11Q99K46 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp11Q99K46 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp11Q99K46 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm11930-201ENSMUST00000117788 190 ntBASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm9083-201ENSMUST00000120423 819 ntBASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm44958-201ENSMUST00000203734 736 ntBASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm8712-201ENSMUST00000221090 701 ntBASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.57□□□□□ -0.4
Usp11Q99K46 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.57□□□□□ -0.4
Usp11Q99K46 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp11Q99K46 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp11Q99K46 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms