Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.88□□□□□ -0.67
Lims1Q99JW4 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Lims1Q99JW4 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Mospd4-201ENSMUST00000180618 576 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Gm38002-201ENSMUST00000193255 180 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.87□□□□□ -0.67
Lims1Q99JW4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Lims1Q99JW4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.86□□□□□ -0.67
Lims1Q99JW4 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm4986-201ENSMUST00000119731 549 ntBASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm28196-201ENSMUST00000187719 640 ntBASIC10.86□□□□□ -0.67
Lims1Q99JW4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Gm19309-201ENSMUST00000218295 205 ntBASIC10.86□□□□□ -0.67
Lims1Q99JW4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Lims1Q99JW4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 187 ms