Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm22133-201ENSMUST00000102082 109 ntBASIC13.82□□□□□ -0.2
Smc1bQ920F6 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm28324-201ENSMUST00000187913 264 ntBASIC13.82□□□□□ -0.2
Smc1bQ920F6 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smc1bQ920F6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm12196-201ENSMUST00000120954 262 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm6905-201ENSMUST00000205729 511 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm45398-201ENSMUST00000210561 165 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm17827-201ENSMUST00000211825 742 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.81□□□□□ -0.2
Smc1bQ920F6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smc1bQ920F6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms