Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.39□□□□□ -0.43
Pcdhb1Q91Y08 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm11660-201ENSMUST00000120955 412 ntBASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb1Q91Y08 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm26361-201ENSMUST00000158868 186 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm5616-201ENSMUST00000165252 384 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm17376-201ENSMUST00000166016 84 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm8741-201ENSMUST00000174736 384 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gm5705-201ENSMUST00000066241 711 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb1Q91Y08 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms