Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb18Q91Y02 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb18Q91Y02 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm12164-201ENSMUST00000121695 551 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm4726-201ENSMUST00000135604 736 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm6019-201ENSMUST00000148369 736 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm8365-201ENSMUST00000197334 648 ntBASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb18Q91Y02 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms