Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm4986-201ENSMUST00000119731 549 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm25037-201ENSMUST00000175418 110 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm27516-201ENSMUST00000184237 98 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm8506-201ENSMUST00000186661 829 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm37439-201ENSMUST00000193150 856 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm6119-201ENSMUST00000193443 1206 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18150-201ENSMUST00000195341 645 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm42926-201ENSMUST00000200496 697 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44909-201ENSMUST00000208756 165 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45458-201ENSMUST00000209900 522 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18645-202ENSMUST00000212222 760 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18160-201ENSMUST00000214279 827 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 AC154528.3-201ENSMUST00000228011 679 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 AC080021.1-201ENSMUST00000228104 700 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm42467-201ENSMUST00000202954 1447 ntBASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb20Q91XZ9 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm15370-201ENSMUST00000117158 253 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13342-201ENSMUST00000121055 207 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm25574-201ENSMUST00000175245 249 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm37433-201ENSMUST00000192695 678 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm37441-201ENSMUST00000194430 678 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm30708-201ENSMUST00000202183 312 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 AC154603.2-201ENSMUST00000223896 577 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 AC159242.1-201ENSMUST00000225832 194 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 AC116596.2-203ENSMUST00000227345 731 ntBASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms