Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm16202-201ENSMUST00000117532 544 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm12384-201ENSMUST00000119228 919 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm37424-201ENSMUST00000191727 561 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm272-201ENSMUST00000222073 919 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm20541-201ENSMUST00000173035 1406 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.17□□□□□ -0.46
Pcdhb3Q91XZ7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm8089-201ENSMUST00000122463 968 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm42433-201ENSMUST00000196806 940 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Olfr1153-201ENSMUST00000052300 957 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Gm42822-201ENSMUST00000200507 1529 ntBASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdhb3Q91XZ7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb3Q91XZ7 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms