Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Gm17330-201ENSMUST00000221047 165 ntBASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Syt7-204ENSMUST00000223586 1344 ntBASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc9Q8VC31 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Gm10463-202ENSMUST00000195772 2889 ntBASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.33□□□□□ -0.11
Ccdc9Q8VC31 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm15321-201ENSMUST00000121290 288 ntBASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc9Q8VC31 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Auts2-212ENSMUST00000178555 309 ntBASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ccdc9Q8VC31 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms