Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps39Q8R5L3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm14644-201ENSMUST00000116671 647 ntBASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm12241-201ENSMUST00000118330 726 ntBASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm3096-201ENSMUST00000185770 364 ntBASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm9136-201ENSMUST00000193368 454 ntBASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm8712-201ENSMUST00000221090 701 ntBASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps39Q8R5L3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm12015-201ENSMUST00000117065 843 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm11989-201ENSMUST00000117240 672 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm11362-201ENSMUST00000118838 850 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm5419-201ENSMUST00000119301 527 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm7722-201ENSMUST00000120646 741 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 145.4 ms