Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Gm18711-201ENSMUST00000199341 750 ntBASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Nudcd3Q8R1N4 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Nudcd3Q8R1N4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm4984-201ENSMUST00000115987 360 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm11591-201ENSMUST00000120063 702 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm13570-201ENSMUST00000140763 309 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd3Q8R1N4 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd3Q8R1N4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms